{ "_id": "6a2528474b233be198393385", "Package": "vglmer", "Type": "Package", "Title": "Variational Inference for Hierarchical Generalized Linear Models", "Version": "1.0.7", "Authors@R": "person(\"Max\", \"Goplerud\", email = \"mgoplerud@austin.utexas.edu\", \nrole = c(\"aut\", \"cre\"))", "Encoding": "UTF-8", "License": "GPL (>= 2)", "Description": "Estimates hierarchical models using variational inference.\nAt present, it can estimate logistic, linear, and negative\nbinomial models. It can accommodate models with an arbitrary\nnumber of random effects and requires no integration to\nestimate. It also provides the ability to improve the quality\nof the approximation using marginal augmentation. Goplerud\n(2022) and Goplerud (2024)\n provide details on the\nvariational algorithms.", "URL": "https://github.com/mgoplerud/vglmer", "BugReports": "https://github.com/mgoplerud/vglmer/issues", "RoxygenNote": "7.3.3", "Config/pak/sysreqs": "cmake make", "Repository": "https://mgoplerud.r-universe.dev", "Date/Publication": "2025-11-09 21:18:01 UTC", "RemoteUrl": "https://github.com/mgoplerud/vglmer", "RemoteRef": "HEAD", "RemoteSha": "76c18849b06929243629ab0ef59bec02a383b953", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-07 08:06:58 UTC", "User": "root" }, "Author": "Max Goplerud [aut, cre]", "Maintainer": "Max Goplerud ", "MD5sum": "732c927b428c36f408fba85d7f9bae53", "_user": "mgoplerud", "_type": "src", "_file": "vglmer_1.0.7.tar.gz", "_fileid": "94b5b239ff4f25af3b31ed0d0ab52f673961da7b8f7c318d94eda8747c95b80a", "_filesize": 286447, "_sha256": "94b5b239ff4f25af3b31ed0d0ab52f673961da7b8f7c318d94eda8747c95b80a", "_created": "2026-06-07T08:06:58.000Z", "_published": "2026-06-07T08:13:59.619Z", "_distro": "noble", "_jobs": [ { "job": 79943143495, "time": 250, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7462221700" }, { "job": 79943143505, "time": 237, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7462219721" }, { "job": 79943143511, "time": 230, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7462219437" }, { "job": 79943143496, "time": 231, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7462218747" }, { "job": 79943143527, "time": 134, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7462205737" }, { "job": 79943143515, "time": 303, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7462228319" }, { "job": 79943143498, "time": 205, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7462215160" }, { "job": 79943143497, "time": 346, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7462234003" }, { "job": 79942950300, "time": 187, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7462187883" }, { "job": 79943143485, "time": 135, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7462206157" }, { "job": 79943143509, "time": 260, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7462222622" }, { "job": 79943143502, "time": 247, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7462220796" }, { "job": 79943143521, "time": 253, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7462221722" } ], "_buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/mgoplerud/vglmer", "_commit": { "id": "76c18849b06929243629ab0ef59bec02a383b953", "author": "mgoplerud ", "committer": "mgoplerud ", "message": "Update tests for reltol [run ci]\n", "time": 1762723081 }, "_maintainer": { "name": "Max Goplerud", "email": "mgoplerud@austin.utexas.edu", "login": "mgoplerud", "description": "Assistant Professor of Government at the University of Texas at Austin", "uuid": 25274138 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.0.2", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppEigen", "version": ">= 0.3.3.4.0", "role": "LinkingTo" }, { "package": "Rcpp", "version": ">= 1.0.1", "role": "Imports" }, { "package": "lme4", "role": "Imports" }, { "package": "CholWishart", "role": "Imports" }, { "package": "mvtnorm", "role": "Imports" }, { "package": "Matrix", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "lmtest", "role": "Imports" }, { "package": "splines", "role": "Imports" }, { "package": "mgcv", "role": "Imports" }, { "package": "SuperLearner", "role": "Suggests" }, { "package": "MASS", "role": "Suggests" }, { "package": "tictoc", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" }, { "package": "gKRLS", "role": "Suggests" } ], "_owner": "mgoplerud", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-40", "n": 1 }, { "week": "2025-45", "n": 5 } ], "_tags": [], "_stars": 21, "_contributors": [ { "user": "mgoplerud", "count": 22, "uuid": 25274138 } ], "_userbio": { "uuid": 25274138, "type": "user", "name": "Max Goplerud", "description": "Assistant Professor of Government at the University of Texas at Austin" }, "_downloads": { "count": 670, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/vglmer" }, "_devurl": "https://github.com/mgoplerud/vglmer", "_searchresults": 9, "_topics": [ "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/vglmer.html", "manual.pdf" ], "_homeurl": "https://github.com/mgoplerud/vglmer", "_realowner": "mgoplerud", "_cranurl": true, "_releases": [ { "version": "1.0.0", "date": "2022-09-14" }, { "version": "1.0.1", "date": "2022-09-17" }, { "version": "1.0.2", "date": "2022-09-23" }, { "version": "1.0.3", "date": "2022-10-27" }, { "version": "1.0.5", "date": "2024-09-12" }, { "version": "1.0.6", "date": "2024-11-07" } ], "_exports": [ "add_formula_SL", "ELBO", "fixef", "format_glmer", "format_vglmer", "MAVB", "posterior_samples.vglmer", "predict_MAVB", "ranef", "SL.glmer", "SL.vglmer", "v_s", "vglmer", "vglmer_control" ], "_help": [ { "page": "MAVB", "title": "Perform MAVB after fitting vglmer", "topics": [ "MAVB" ] }, { "page": "posterior_samples.vglmer", "title": "Draw samples from the variational distribution", "topics": [ "posterior_samples.vglmer" ] }, { "page": "sl_vglmer", "title": "SuperLearner with (Variational) Hierarchical Models", "topics": [ "add_formula_SL", "predict.SL.glmer", "predict.SL.vglmer", "SL.glmer", "SL.vglmer", "sl_vglmer" ] }, { "page": "v_s", "title": "Create splines for use in vglmer", "topics": [ "v_s" ] }, { "page": "vglmer", "title": "Variational Inference for Hierarchical Generalized Linear Models", "topics": [ "vglmer" ] }, { "page": "vglmer_control", "title": "Control for vglmer estimation", "topics": [ "vglmer_control" ] }, { "page": "vglmer_predict", "title": "Predict after vglmer", "topics": [ "predict.vglmer", "predict_MAVB", "vglmer_predict" ] }, { "page": "vglmer-class", "title": "Generic Functions after Running vglmer", "topics": [ "coef.vglmer", "ELBO", "fitted.vglmer", "fixef.vglmer", "format_glmer", "format_vglmer", "formula.vglmer", "print.vglmer", "ranef.vglmer", "sigma.vglmer", "summary.vglmer", "vcov.vglmer", "vglmer-class" ] } ], "_readme": "https://github.com/mgoplerud/vglmer/raw/HEAD/README.md", "_rundeps": [ "boot", "CholWishart", "lattice", "lme4", "lmtest", "MASS", "Matrix", "mgcv", "minqa", "mvtnorm", "nlme", "nloptr", "rbibutils", "Rcpp", "RcppEigen", "Rdpack", "reformulas", "rlang", "zoo" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 4.3222192947339195, "_indexed": true, "_nocasepkg": "vglmer", "_universes": [ "mgoplerud" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.7", "date": "2026-06-07T08:10:13.000Z", "distro": "noble", "arch": "aarch64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "0faaefb1593086f8f90492fff3ac71c8e46a5b5727088a0a7730b3889ff65c0c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.7.0", "os": "linux", "version": "1.0.7", "date": "2026-06-07T08:09:44.000Z", "distro": "noble", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "5d82c2c587a68130a598555d81a00972030980613019c8b30e968f71e6a691bd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "linux", "version": "1.0.7", "date": "2026-06-07T08:10:01.000Z", "distro": "noble", "arch": "aarch64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "9cff23b66574103e02cb6f9367c9679eeddf3c61f4b9f49daca545bea7245af5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "linux", "version": "1.0.7", "date": "2026-06-07T08:09:40.000Z", "distro": "noble", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "79cbdaeaf63f32f9c5069f1d15e6eff89950da29fe826219c4405dfcf25c0674", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.5.3", "os": "mac", "version": "1.0.7", "date": "2026-06-07T08:08:50.000Z", "arch": "aarch64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "2a12d236b419d268ea20435d656e68d4710d60a3e1a1a594b75366e7aa76c58b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.5.3", "os": "mac", "version": "1.0.7", "date": "2026-06-07T08:10:25.000Z", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "4165f0f918a079f8feb75e34aeee1ba21a4c81f326b1d2d6e88da291f7bf7003", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "mac", "version": "1.0.7", "date": "2026-06-07T08:09:23.000Z", "arch": "aarch64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "37a353ff43ce9d26666a15466abb88618f26ba42baaccb071605e403c16588e5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "mac", "version": "1.0.7", "date": "2026-06-07T08:10:45.000Z", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "017e064ca4a917bf8732b773bc97796dea005106b91891e44065ba2f351430a1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.7", "date": "2026-06-07T08:09:37.000Z", "arch": "emscripten", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "397ba95acc3d0eab621b8bb0b0bd5136ec7c1d7fe4680c38e1a87601d58252f2", "status": "success", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.7.0", "os": "win", "version": "1.0.7", "date": "2026-06-07T08:09:14.000Z", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "dcac7d7f2668c03077cdec4d3495fbb7d2839fcbcbd2303ef28e1b9838129a22", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.5.3", "os": "win", "version": "1.0.7", "date": "2026-06-07T08:09:33.000Z", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "f40ecddf1502728caa01403d30962cd639c1951150be8c8d62f3b59628703bda", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" }, { "r": "4.6.0", "os": "win", "version": "1.0.7", "date": "2026-06-07T08:09:06.000Z", "arch": "x86_64", "commit": "76c18849b06929243629ab0ef59bec02a383b953", "fileid": "e8e04a2fc08d4c1d49f9004194f85dbacdfd2c2de8319153b76a57aa27dc5238", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mgoplerud/actions/runs/27086869874" } ] }